Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NR4A2P43354 HLA-V-201ENST00000429037 534 ntBASIC13.36□□□□□ -0.27
NR4A2P43354 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.36□□□□□ -0.27
NR4A2P43354 AC007389.4-201ENST00000454674 793 ntBASIC13.36□□□□□ -0.27
NR4A2P43354 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.36□□□□□ -0.27
NR4A2P43354 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.36□□□□□ -0.27
NR4A2P43354 HNRNPUP1-201ENST00000554987 333 ntBASIC13.36□□□□□ -0.27
NR4A2P43354 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
NR4A2P43354 WFDC1-204ENST00000613603 549 ntBASIC13.36□□□□□ -0.27
NR4A2P43354 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NR4A2P43354 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 CLK3P2-201ENST00000427566 1453 ntBASIC13.36□□□□□ -0.27
NR4A2P43354 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 Z97205.2-201ENST00000564697 1639 ntBASIC13.35□□□□□ -0.27
NR4A2P43354 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.35□□□□□ -0.27
NR4A2P43354 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.35□□□□□ -0.27
NR4A2P43354 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.35□□□□□ -0.27
NR4A2P43354 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.35□□□□□ -0.27
NR4A2P43354 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.35□□□□□ -0.27
NR4A2P43354 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NR4A2P43354 MIR8072-201ENST00000614241 80 ntBASIC13.35□□□□□ -0.27
NR4A2P43354 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NR4A2P43354 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 AC073548.1-201ENST00000624088 1882 ntBASIC13.35□□□□□ -0.27
NR4A2P43354 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
NR4A2P43354 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NR4A2P43354 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.35□□□□□ -0.27
NR4A2P43354 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NR4A2P43354 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NR4A2P43354 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NR4A2P43354 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NR4A2P43354 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A2P43354 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NR4A2P43354 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.34□□□□□ -0.27
NR4A2P43354 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NR4A2P43354 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms