Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 NUP210P1-202ENST00000504322 710 ntBASIC13.39□□□□□ -0.27
RFC3P40938 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 SNORD3B-2-202ENST00000571722 791 ntBASIC13.39□□□□□ -0.27
RFC3P40938 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.39□□□□□ -0.27
RFC3P40938 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AC008825.2-201ENST00000603374 718 ntBASIC13.39□□□□□ -0.27
RFC3P40938 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AC091812.3-201ENST00000621362 345 ntBASIC13.39□□□□□ -0.27
RFC3P40938 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFC3P40938 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RFC3P40938 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
RFC3P40938 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.38□□□□□ -0.27
RFC3P40938 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 AC091046.1-201ENST00000331871 207 ntBASIC13.38□□□□□ -0.27
RFC3P40938 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.38□□□□□ -0.27
RFC3P40938 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 FAM58BP-201ENST00000439056 645 ntBASIC13.38□□□□□ -0.27
RFC3P40938 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 RN7SL720P-201ENST00000488178 304 ntBASIC13.38□□□□□ -0.27
RFC3P40938 HLA-J-204ENST00000495278 958 ntBASIC13.38□□□□□ -0.27
RFC3P40938 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.38□□□□□ -0.27
RFC3P40938 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 AC024681.1-201ENST00000521917 487 ntBASIC13.38□□□□□ -0.27
RFC3P40938 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 AC090857.1-201ENST00000527400 390 ntBASIC13.38□□□□□ -0.27
RFC3P40938 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.38□□□□□ -0.27
RFC3P40938 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 AC079328.1-201ENST00000560358 952 ntBASIC13.38□□□□□ -0.27
RFC3P40938 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.38□□□□□ -0.27
RFC3P40938 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.38□□□□□ -0.27
RFC3P40938 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.38□□□□□ -0.27
RFC3P40938 MIR3619-201ENST00000579667 83 ntBASIC13.38□□□□□ -0.27
RFC3P40938 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 BX088702.1-201ENST00000610784 235 ntBASIC13.38□□□□□ -0.27
RFC3P40938 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.38□□□□□ -0.27
RFC3P40938 AC015967.2-201ENST00000624092 234 ntBASIC13.38□□□□□ -0.27
RFC3P40938 AC006435.4-201ENST00000625037 234 ntBASIC13.38□□□□□ -0.27
RFC3P40938 AL356737.1-201ENST00000634391 234 ntBASIC13.38□□□□□ -0.27
RFC3P40938 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.38□□□□□ -0.27
RFC3P40938 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RFC3P40938 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.38□□□□□ -0.27
RFC3P40938 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms