Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CLCN1P35523 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CLCN1P35523 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CLCN1P35523 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CLCN1P35523 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.62■□□□□ 0.25
CLCN1P35523 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CLCN1P35523 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN1P35523 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.62■□□□□ 0.25
CLCN1P35523 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN1P35523 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 AL589987.1-201ENST00000453380 819 ntBASIC16.62■□□□□ 0.25
CLCN1P35523 SPDYE18-201ENST00000510091 1050 ntBASIC16.62■□□□□ 0.25
CLCN1P35523 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.62■□□□□ 0.25
CLCN1P35523 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.62■□□□□ 0.25
CLCN1P35523 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CLCN1P35523 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 AC106028.4-201ENST00000614509 607 ntBASIC16.62■□□□□ 0.25
CLCN1P35523 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CLCN1P35523 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.62■□□□□ 0.25
CLCN1P35523 AC027369.3-201ENST00000530465 3707 ntBASIC16.62■□□□□ 0.25
CLCN1P35523 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLCN1P35523 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 BTBD7P1-201ENST00000447253 1453 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 PER1-202ENST00000354903 3115 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCN1P35523 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLCN1P35523 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 MRPS18AP1-201ENST00000414458 589 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 KRT18P43-201ENST00000469825 1281 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.61■□□□□ 0.25
CLCN1P35523 AC025181.2-201ENST00000606994 802 ntBASIC16.61■□□□□ 0.25
CLCN1P35523 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLCN1P35523 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.61■□□□□ 0.25
CLCN1P35523 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLCN1P35523 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms