Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 AC068760.1-201ENST00000493579 1953 ntBASIC19.17■□□□□ 0.66
USP6P35125 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.17■□□□□ 0.66
USP6P35125 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP6P35125 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.17■□□□□ 0.66
USP6P35125 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.17■□□□□ 0.66
USP6P35125 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC19.17■□□□□ 0.66
USP6P35125 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC19.16■□□□□ 0.66
USP6P35125 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 PSAT1P2-201ENST00000426107 972 ntBASIC19.16■□□□□ 0.66
USP6P35125 ALG1L3P-201ENST00000503331 765 ntBASIC19.16■□□□□ 0.66
USP6P35125 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC19.16■□□□□ 0.66
USP6P35125 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC19.16■□□□□ 0.66
USP6P35125 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC19.16■□□□□ 0.66
USP6P35125 AL136982.5-201ENST00000605222 294 ntBASIC19.16■□□□□ 0.66
USP6P35125 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
USP6P35125 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC19.16■□□□□ 0.66
USP6P35125 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.15■□□□□ 0.66
USP6P35125 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP6P35125 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6P35125 AL139158.3-201ENST00000641212 1562 ntBASIC19.15■□□□□ 0.66
USP6P35125 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6P35125 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 AL109809.1-201ENST00000418979 1367 ntBASIC19.15■□□□□ 0.66
USP6P35125 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6P35125 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
USP6P35125 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
USP6P35125 OR2W2P-201ENST00000406313 909 ntBASIC19.15■□□□□ 0.66
USP6P35125 HMGA1P1-201ENST00000415560 1062 ntBASIC19.15■□□□□ 0.66
USP6P35125 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.15■□□□□ 0.66
USP6P35125 AC090136.2-201ENST00000517809 420 ntBASIC19.15■□□□□ 0.66
USP6P35125 AC012158.2-201ENST00000536546 354 ntBASIC19.15■□□□□ 0.66
USP6P35125 GOLGA2P7-209ENST00000560408 745 ntBASIC19.15■□□□□ 0.66
USP6P35125 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC19.15■□□□□ 0.66
USP6P35125 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC19.15■□□□□ 0.66
USP6P35125 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 ADK-205ENST00000539909 1866 ntTSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP6P35125 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP6P35125 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
USP6P35125 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.14■□□□□ 0.66
USP6P35125 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
USP6P35125 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
USP6P35125 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP6P35125 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms