Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A4P31645 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A4P31645 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A4P31645 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A4P31645 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A4P31645 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A4P31645 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC6A4P31645 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A4P31645 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 RTN3P1-201ENST00000536295 711 ntBASIC14.86□□□□□ -0.03
SLC6A4P31645 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 AC242376.1-201ENST00000559033 726 ntBASIC14.86□□□□□ -0.03
SLC6A4P31645 AL109837.1-201ENST00000603272 613 ntBASIC14.86□□□□□ -0.03
SLC6A4P31645 AC079336.7-201ENST00000623428 1078 ntBASIC14.86□□□□□ -0.03
SLC6A4P31645 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A4P31645 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A4P31645 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A4P31645 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SLC6A4P31645 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A4P31645 AL365209.1-201ENST00000624418 6473 ntBASIC14.86□□□□□ -0.03
SLC6A4P31645 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SLC6A4P31645 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC6A4P31645 AC007274.2-201ENST00000421675 662 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC6A4P31645 AL353637.1-201ENST00000451571 732 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 RN7SL769P-201ENST00000469386 295 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 RN7SL277P-201ENST00000481521 288 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 POU5F1P2-201ENST00000521750 823 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 AC134698.3-201ENST00000523880 214 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC6A4P31645 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 AL133499.1-201ENST00000596207 608 ntBASIC14.85□□□□□ -0.03
SLC6A4P31645 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC6A4P31645 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A4P31645 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A4P31645 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A4P31645 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms