Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.41□□□□□ -0.26
SHC1P29353 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.41□□□□□ -0.26
SHC1P29353 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.41□□□□□ -0.26
SHC1P29353 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 AL359881.2-201ENST00000602973 570 ntBASIC13.41□□□□□ -0.26
SHC1P29353 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.41□□□□□ -0.26
SHC1P29353 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SHC1P29353 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SHC1P29353 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.41□□□□□ -0.26
SHC1P29353 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHC1P29353 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SHC1P29353 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SHC1P29353 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.4□□□□□ -0.26
SHC1P29353 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.4□□□□□ -0.26
SHC1P29353 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.4□□□□□ -0.26
SHC1P29353 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.4□□□□□ -0.26
SHC1P29353 YBX1P6-201ENST00000442962 1002 ntBASIC13.4□□□□□ -0.26
SHC1P29353 HIST2H2BB-201ENST00000449108 381 ntBASIC13.4□□□□□ -0.26
SHC1P29353 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.4□□□□□ -0.26
SHC1P29353 GCOM2-201ENST00000509133 1104 ntBASIC13.4□□□□□ -0.26
SHC1P29353 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.4□□□□□ -0.26
SHC1P29353 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.4□□□□□ -0.26
SHC1P29353 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.4□□□□□ -0.26
SHC1P29353 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.4□□□□□ -0.26
SHC1P29353 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 AL358472.3-201ENST00000608147 415 ntBASIC13.4□□□□□ -0.26
SHC1P29353 AC002472.3-201ENST00000640124 621 ntBASIC13.4□□□□□ -0.26
SHC1P29353 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms