Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.84□□□□□ -0.19
PTPN6P29350 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTPN6P29350 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PTPN6P29350 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.83□□□□□ -0.19
PTPN6P29350 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.83□□□□□ -0.19
PTPN6P29350 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTPN6P29350 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PTPN6P29350 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PTPN6P29350 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 CNN2P8-201ENST00000421872 913 ntBASIC13.83□□□□□ -0.2
PTPN6P29350 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.83□□□□□ -0.2
PTPN6P29350 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.83□□□□□ -0.2
PTPN6P29350 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.83□□□□□ -0.2
PTPN6P29350 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.83□□□□□ -0.2
PTPN6P29350 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.83□□□□□ -0.2
PTPN6P29350 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.83□□□□□ -0.2
PTPN6P29350 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.83□□□□□ -0.2
PTPN6P29350 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PTPN6P29350 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.83□□□□□ -0.2
PTPN6P29350 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.83□□□□□ -0.2
PTPN6P29350 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTPN6P29350 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.82□□□□□ -0.2
PTPN6P29350 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.82□□□□□ -0.2
PTPN6P29350 AC072061.1-201ENST00000569710 2234 ntBASIC13.82□□□□□ -0.2
PTPN6P29350 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
PTPN6P29350 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 AP003171.2-201ENST00000528208 925 ntBASIC13.82□□□□□ -0.2
PTPN6P29350 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PTPN6P29350 AC104506.1-201ENST00000609247 429 ntBASIC13.82□□□□□ -0.2
PTPN6P29350 RHOXF1P1-202ENST00000635473 501 ntBASIC13.82□□□□□ -0.2
PTPN6P29350 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.82□□□□□ -0.2
PTPN6P29350 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PTPN6P29350 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.82□□□□□ -0.2
PTPN6P29350 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 PPT1-213ENST00000641319 2388 ntBASIC13.82□□□□□ -0.2
PTPN6P29350 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTPN6P29350 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTPN6P29350 AL022313.4-201ENST00000562756 2046 ntBASIC13.81□□□□□ -0.2
PTPN6P29350 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms