Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 DMBT1P1-203ENST00000636837 4628 ntBASIC14.22□□□□□ -0.13
EPHA3P29320 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA3P29320 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 NCLP1-201ENST00000445357 1963 ntBASIC14.22□□□□□ -0.13
EPHA3P29320 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EPHA3P29320 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA3P29320 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 AL445209.1-201ENST00000607269 3491 ntBASIC14.21□□□□□ -0.13
EPHA3P29320 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
EPHA3P29320 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA3P29320 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 AL022313.4-201ENST00000562756 2046 ntBASIC14.21□□□□□ -0.13
EPHA3P29320 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
EPHA3P29320 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA3P29320 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA3P29320 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.21□□□□□ -0.13
EPHA3P29320 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA3P29320 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA3P29320 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA3P29320 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA3P29320 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA3P29320 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.21□□□□□ -0.13
EPHA3P29320 AC005252.2-201ENST00000624630 1141 ntBASIC14.21□□□□□ -0.13
EPHA3P29320 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA3P29320 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.21□□□□□ -0.13
EPHA3P29320 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EPHA3P29320 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.21□□□□□ -0.13
EPHA3P29320 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EPHA3P29320 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EPHA3P29320 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.21□□□□□ -0.14
EPHA3P29320 AL590440.2-201ENST00000641973 1595 ntBASIC14.21□□□□□ -0.14
EPHA3P29320 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.21□□□□□ -0.14
EPHA3P29320 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.21□□□□□ -0.14
EPHA3P29320 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EPHA3P29320 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 AC005014.1-201ENST00000432006 2976 ntBASIC14.2□□□□□ -0.14
EPHA3P29320 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.2□□□□□ -0.14
EPHA3P29320 AL512638.1-201ENST00000457493 794 ntBASIC14.2□□□□□ -0.14
EPHA3P29320 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA3P29320 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.2□□□□□ -0.14
EPHA3P29320 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.2□□□□□ -0.14
EPHA3P29320 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.2□□□□□ -0.14
EPHA3P29320 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
EPHA3P29320 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
EPHA3P29320 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.2□□□□□ -0.14
EPHA3P29320 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EPHA3P29320 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms