Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
RXRBP28702 AL049840.2-201ENST00000602722 535 ntBASIC18.44■□□□□ 0.54
RXRBP28702 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 AC002511.3-201ENST00000638098 420 ntBASIC18.44■□□□□ 0.54
RXRBP28702 CDIPT-AS1-203ENST00000638164 713 ntBASIC18.44■□□□□ 0.54
RXRBP28702 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC18.44■□□□□ 0.54
RXRBP28702 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RXRBP28702 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.44■□□□□ 0.54
RXRBP28702 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RXRBP28702 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 AC012313.1-201ENST00000593393 3059 ntBASIC18.43■□□□□ 0.54
RXRBP28702 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 AC015688.4-201ENST00000580780 1647 ntBASIC18.43■□□□□ 0.54
RXRBP28702 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 RN7SL47P-201ENST00000488710 299 ntBASIC18.43■□□□□ 0.54
RXRBP28702 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC18.43■□□□□ 0.54
RXRBP28702 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC18.43■□□□□ 0.54
RXRBP28702 MIR8071-1-201ENST00000616769 65 ntBASIC18.43■□□□□ 0.54
RXRBP28702 MIR8071-2-201ENST00000616772 65 ntBASIC18.43■□□□□ 0.54
RXRBP28702 AC099552.4-201ENST00000624248 949 ntBASIC18.43■□□□□ 0.54
RXRBP28702 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC18.43■□□□□ 0.54
RXRBP28702 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
RXRBP28702 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RXRBP28702 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC18.42■□□□□ 0.54
RXRBP28702 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.42■□□□□ 0.54
RXRBP28702 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
RXRBP28702 NOS2P3-201ENST00000411468 867 ntBASIC18.42■□□□□ 0.54
RXRBP28702 AL049792.1-201ENST00000424708 1262 ntBASIC18.42■□□□□ 0.54
RXRBP28702 NOS2P2-201ENST00000426269 867 ntBASIC18.42■□□□□ 0.54
RXRBP28702 AL137077.1-201ENST00000442115 528 ntBASIC18.42■□□□□ 0.54
RXRBP28702 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.42■□□□□ 0.54
RXRBP28702 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC18.42■□□□□ 0.54
RXRBP28702 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC18.42■□□□□ 0.54
RXRBP28702 AC104115.1-201ENST00000484005 623 ntBASIC18.42■□□□□ 0.54
RXRBP28702 PDPN-208ENST00000509009 571 ntTSL 4 BASIC18.42■□□□□ 0.54
RXRBP28702 AC005586.2-201ENST00000563946 837 ntBASIC18.42■□□□□ 0.54
RXRBP28702 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RXRBP28702 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC18.42■□□□□ 0.54
RXRBP28702 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RXRBP28702 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.42■□□□□ 0.54
RXRBP28702 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RXRBP28702 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RXRBP28702 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RXRBP28702 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms