Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.07□□□□□ -0.32
HLA-DOBP13765 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AL035414.1-201ENST00000451327 857 ntBASIC13.07□□□□□ -0.32
HLA-DOBP13765 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 MIR4783-201ENST00000580343 82 ntBASIC13.07□□□□□ -0.32
HLA-DOBP13765 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AC087386.2-201ENST00000623212 4637 ntBASIC13.07□□□□□ -0.32
HLA-DOBP13765 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HLA-DOBP13765 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC027237.1-201ENST00000560942 655 ntBASIC13.06□□□□□ -0.32
HLA-DOBP13765 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DOBP13765 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms