Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CD28P10747 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
CD28P10747 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.41□□□□□ -0.58
CD28P10747 CYP4F23P-201ENST00000593402 1579 ntBASIC11.41□□□□□ -0.58
CD28P10747 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 CICP23-201ENST00000605013 2741 ntBASIC11.41□□□□□ -0.58
CD28P10747 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 LINC01101-201ENST00000622953 1884 ntBASIC11.41□□□□□ -0.58
CD28P10747 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.41□□□□□ -0.58
CD28P10747 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC11.41□□□□□ -0.58
CD28P10747 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
CD28P10747 CFL1-214ENST00000534769 758 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CD28P10747 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.41□□□□□ -0.58
CD28P10747 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 SPCS2P2-201ENST00000603270 608 ntBASIC11.41□□□□□ -0.58
CD28P10747 U62317.3-201ENST00000608319 855 ntBASIC11.41□□□□□ -0.58
CD28P10747 AC133540.1-201ENST00000620845 1019 ntBASIC11.41□□□□□ -0.58
CD28P10747 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 SNX1-214ENST00000625244 324 ntTSL 5 BASIC11.41□□□□□ -0.58
CD28P10747 AC006453.1-201ENST00000636037 1257 ntBASIC11.41□□□□□ -0.58
CD28P10747 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 FAM45BP-202ENST00000592932 1624 ntBASIC11.41□□□□□ -0.58
CD28P10747 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC11.41□□□□□ -0.58
CD28P10747 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CD28P10747 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 MRPL37P1-201ENST00000592451 1337 ntBASIC11.4□□□□□ -0.58
CD28P10747 AL009178.2-201ENST00000597278 2719 ntBASIC11.4□□□□□ -0.58
CD28P10747 AC006486.2-201ENST00000624246 2199 ntBASIC11.4□□□□□ -0.58
CD28P10747 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.4□□□□□ -0.58
CD28P10747 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.4□□□□□ -0.58
CD28P10747 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ACE3P-201ENST00000423435 1973 ntBASIC11.4□□□□□ -0.58
CD28P10747 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CD28P10747 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.4□□□□□ -0.58
CD28P10747 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CD28P10747 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms