Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 PES1P2-201ENST00000449745 1735 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 AC007952.5-201ENST00000572818 1486 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 ENPP7P8-202ENST00000527856 1345 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 RNA5SP491-201ENST00000362936 118 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPRFP10586 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPRFP10586 IFNWP2-201ENST00000431203 580 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPRFP10586 URAHP-205ENST00000610227 398 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 AL627230.2-201ENST00000613254 655 ntBASIC16.21■□□□□ 0.19
PTPRFP10586 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPRFP10586 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPRFP10586 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPRFP10586 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PTPRFP10586 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPRFP10586 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PTPRFP10586 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPRFP10586 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 RPL13AP3-202ENST00000494676 1473 ntBASIC16.2■□□□□ 0.18
PTPRFP10586 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 SNORA57-201ENST00000383870 149 ntBASIC16.2■□□□□ 0.18
PTPRFP10586 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPRFP10586 AC100858.1-201ENST00000514059 1228 ntBASIC16.2■□□□□ 0.18
PTPRFP10586 MIR5001-201ENST00000580185 100 ntBASIC16.2■□□□□ 0.18
PTPRFP10586 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPRFP10586 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPRFP10586 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTPRFP10586 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPRFP10586 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPRFP10586 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPRFP10586 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPRFP10586 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPRFP10586 GULOP-201ENST00000454030 748 ntBASIC16.19■□□□□ 0.18
PTPRFP10586 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPRFP10586 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPRFP10586 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPRFP10586 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPRFP10586 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.19■□□□□ 0.18
PTPRFP10586 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPRFP10586 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPRFP10586 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms