Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AC007614.4-201ENST00000564048 1827 ntBASIC10.94□□□□□ -0.66
SMIM17P0DL12 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RPL13P2-201ENST00000440687 659 ntBASIC10.94□□□□□ -0.66
SMIM17P0DL12 SPDYE14P-201ENST00000442619 822 ntBASIC10.94□□□□□ -0.66
SMIM17P0DL12 ALG1L5P-201ENST00000482043 771 ntBASIC10.94□□□□□ -0.66
SMIM17P0DL12 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SMIM17P0DL12 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 AC004461.1-201ENST00000412461 403 ntBASIC10.93□□□□□ -0.66
SMIM17P0DL12 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM17P0DL12 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM17P0DL12 SDHAP3-202ENST00000515467 728 ntBASIC10.93□□□□□ -0.66
SMIM17P0DL12 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms