Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL591122.2-201ENST00000624125 1853 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A21P-201ENST00000510875 1396 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A15P-201ENST00000514465 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A6P-201ENST00000515148 1394 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A16P-201ENST00000526662 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A9P-201ENST00000527940 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A5P-201ENST00000528738 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A14P-201ENST00000530386 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 FAM90A13P-201ENST00000534703 1395 ntBASIC16.24■□□□□ 0.19
HOXC6P09630 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HOXC6P09630 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.24■□□□□ 0.19
HOXC6P09630 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.24■□□□□ 0.19
HOXC6P09630 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 CTBP2P8-201ENST00000422584 1330 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 TNRC18P2-201ENST00000417666 2714 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 LINC00265-2P-201ENST00000413372 782 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 ACTG1P19-201ENST00000418987 1116 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.23■□□□□ 0.19
HOXC6P09630 AL118516.1-201ENST00000564152 670 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 AC055811.3-201ENST00000584952 686 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 AC012073.1-201ENST00000606114 1108 ntBASIC16.23■□□□□ 0.19
HOXC6P09630 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HOXC6P09630 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.23■□□□□ 0.19
HOXC6P09630 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.23■□□□□ 0.19
HOXC6P09630 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
HOXC6P09630 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.22■□□□□ 0.19
HOXC6P09630 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HOXC6P09630 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.22■□□□□ 0.19
HOXC6P09630 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC6P09630 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC6P09630 RN7SL564P-201ENST00000496309 250 ntBASIC16.22■□□□□ 0.19
HOXC6P09630 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 FAM86B3P-203ENST00000523992 854 ntBASIC16.22■□□□□ 0.19
HOXC6P09630 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
HOXC6P09630 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC6P09630 AL118522.1-201ENST00000611368 560 ntBASIC16.22■□□□□ 0.19
HOXC6P09630 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.22■□□□□ 0.19
HOXC6P09630 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HOXC6P09630 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms