Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 HILS1-202ENST00000545329 423 ntBASIC12.77□□□□□ -0.37
SFTPBP07988 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.77□□□□□ -0.37
SFTPBP07988 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.77□□□□□ -0.37
SFTPBP07988 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.77□□□□□ -0.37
SFTPBP07988 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.77□□□□□ -0.37
SFTPBP07988 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SFTPBP07988 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.77□□□□□ -0.37
SFTPBP07988 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SFTPBP07988 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 AC089987.1-201ENST00000551654 2209 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.76□□□□□ -0.37
SFTPBP07988 SOCS2P1-201ENST00000417727 557 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.76□□□□□ -0.37
SFTPBP07988 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 AC026434.2-201ENST00000506094 1078 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 AC022447.6-201ENST00000515522 438 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.76□□□□□ -0.37
SFTPBP07988 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.76□□□□□ -0.37
SFTPBP07988 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.76□□□□□ -0.37
SFTPBP07988 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 AC008735.3-201ENST00000596646 500 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 RPSAP52-203ENST00000622976 1023 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 AGGF1P1-201ENST00000509500 2073 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 MEX3B-202ENST00000558133 4333 ntBASIC12.76□□□□□ -0.37
SFTPBP07988 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SFTPBP07988 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.76□□□□□ -0.37
SFTPBP07988 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SFTPBP07988 COL6A4P2-202ENST00000504443 2753 ntBASIC12.75□□□□□ -0.37
SFTPBP07988 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SFTPBP07988 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SFTPBP07988 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.75□□□□□ -0.37
SFTPBP07988 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.75□□□□□ -0.37
SFTPBP07988 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SFTPBP07988 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms