Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM3P06753 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.39■□□□□ 0.21
TPM3P06753 FAM86LP-201ENST00000478302 853 ntBASIC16.39■□□□□ 0.21
TPM3P06753 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM3P06753 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM3P06753 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 AC010327.4-202ENST00000591484 748 ntBASIC16.39■□□□□ 0.21
TPM3P06753 AL049840.4-201ENST00000602422 811 ntBASIC16.39■□□□□ 0.21
TPM3P06753 AL844908.2-201ENST00000609461 460 ntBASIC16.39■□□□□ 0.21
TPM3P06753 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
TPM3P06753 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM3P06753 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 PCDHB18P-202ENST00000526308 3197 ntBASIC16.39■□□□□ 0.21
TPM3P06753 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 AL157996.1-201ENST00000624684 2299 ntBASIC16.39■□□□□ 0.21
TPM3P06753 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TPM3P06753 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.39■□□□□ 0.21
TPM3P06753 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM3P06753 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TPM3P06753 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TPM3P06753 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
TPM3P06753 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TPM3P06753 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.38■□□□□ 0.21
TPM3P06753 KRT18P13-201ENST00000400056 1290 ntBASIC16.38■□□□□ 0.21
TPM3P06753 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.38■□□□□ 0.21
TPM3P06753 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.38■□□□□ 0.21
TPM3P06753 KLF2P3-201ENST00000451977 1087 ntBASIC16.38■□□□□ 0.21
TPM3P06753 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.38■□□□□ 0.21
TPM3P06753 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 AC112482.1-201ENST00000492080 688 ntBASIC16.38■□□□□ 0.21
TPM3P06753 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.38■□□□□ 0.21
TPM3P06753 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.38■□□□□ 0.21
TPM3P06753 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
TPM3P06753 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 AL391069.4-201ENST00000609583 481 ntBASIC16.38■□□□□ 0.21
TPM3P06753 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TPM3P06753 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM3P06753 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms