Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AC005252.3-201ENST00000623855 2258 ntBASIC14.64□□□□□ -0.07
APOA4P06727 AL031595.1-201ENST00000623969 4709 ntBASIC14.64□□□□□ -0.07
APOA4P06727 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AC089987.1-201ENST00000551654 2209 ntBASIC14.64□□□□□ -0.07
APOA4P06727 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AC020910.5-201ENST00000623668 1865 ntBASIC14.64□□□□□ -0.07
APOA4P06727 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AC112492.5-201ENST00000421897 457 ntBASIC14.64□□□□□ -0.07
APOA4P06727 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 U91328.1-201ENST00000437528 223 ntBASIC14.64□□□□□ -0.07
APOA4P06727 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.64□□□□□ -0.07
APOA4P06727 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 CTBP2P5-201ENST00000454986 1264 ntBASIC14.64□□□□□ -0.07
APOA4P06727 GPR53P-205ENST00000457298 1084 ntBASIC14.64□□□□□ -0.07
APOA4P06727 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 GCOM2-201ENST00000509133 1104 ntBASIC14.64□□□□□ -0.07
APOA4P06727 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.64□□□□□ -0.07
APOA4P06727 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.64□□□□□ -0.07
APOA4P06727 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
APOA4P06727 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.64□□□□□ -0.07
APOA4P06727 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 AL512343.1-201ENST00000605837 169 ntBASIC14.64□□□□□ -0.07
APOA4P06727 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.64□□□□□ -0.07
APOA4P06727 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOA4P06727 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA4P06727 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 AHCYP2-201ENST00000430630 1300 ntBASIC14.64□□□□□ -0.07
APOA4P06727 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA4P06727 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 RN7SKP175-201ENST00000408472 289 ntBASIC14.63□□□□□ -0.07
APOA4P06727 MIR1202-201ENST00000408529 83 ntBASIC14.63□□□□□ -0.07
APOA4P06727 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA4P06727 COX5BP1-201ENST00000507622 393 ntBASIC14.63□□□□□ -0.07
APOA4P06727 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA4P06727 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA4P06727 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.63□□□□□ -0.07
APOA4P06727 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA4P06727 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA4P06727 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA4P06727 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA4P06727 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.63□□□□□ -0.07
APOA4P06727 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOA4P06727 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms