Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.85■□□□□ 0.13
VTNP04004 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.85■□□□□ 0.13
VTNP04004 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
VTNP04004 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VTNP04004 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VTNP04004 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VTNP04004 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VTNP04004 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VTNP04004 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VTNP04004 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VTNP04004 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 OR8T1P-201ENST00000421347 918 ntBASIC15.84■□□□□ 0.13
VTNP04004 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 AC098935.1-201ENST00000446057 611 ntBASIC15.84■□□□□ 0.13
VTNP04004 AC008267.1-201ENST00000474858 1069 ntBASIC15.84■□□□□ 0.13
VTNP04004 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.84■□□□□ 0.13
VTNP04004 ALG1L13P-202ENST00000519320 584 ntBASIC15.84■□□□□ 0.13
VTNP04004 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 KRT8P1-201ENST00000557533 1207 ntBASIC15.84■□□□□ 0.13
VTNP04004 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.84■□□□□ 0.13
VTNP04004 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.84■□□□□ 0.13
VTNP04004 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 AC005632.3-201ENST00000605544 308 ntBASIC15.84■□□□□ 0.13
VTNP04004 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
VTNP04004 AC242376.2-201ENST00000619355 883 ntBASIC15.84■□□□□ 0.13
VTNP04004 YRDCP1-201ENST00000621419 643 ntBASIC15.84■□□□□ 0.13
VTNP04004 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.84■□□□□ 0.13
VTNP04004 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 AC113367.3-201ENST00000508316 1912 ntBASIC15.84■□□□□ 0.13
VTNP04004 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VTNP04004 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VTNP04004 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VTNP04004 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
VTNP04004 MARK2P16-201ENST00000605714 1723 ntBASIC15.83■□□□□ 0.13
VTNP04004 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 FTH1P22-201ENST00000456305 520 ntBASIC15.83■□□□□ 0.12
VTNP04004 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.83■□□□□ 0.12
VTNP04004 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.83■□□□□ 0.12
VTNP04004 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.83■□□□□ 0.12
VTNP04004 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 AC087045.2-201ENST00000606279 1003 ntBASIC15.83■□□□□ 0.12
VTNP04004 AC007881.3-201ENST00000608897 607 ntBASIC15.83■□□□□ 0.12
VTNP04004 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 AC064801.2-201ENST00000625052 1303 ntBASIC15.83■□□□□ 0.12
VTNP04004 AP001267.2-201ENST00000532619 2086 ntBASIC15.83■□□□□ 0.12
VTNP04004 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.83■□□□□ 0.12
VTNP04004 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.83■□□□□ 0.12
VTNP04004 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VTNP04004 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms