Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 AC134312.5-201ENST00000568031 1313 ntBASIC12.98□□□□□ -0.33
APOC1P02654 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOC1P02654 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 AC012441.1-201ENST00000446669 685 ntBASIC12.98□□□□□ -0.33
APOC1P02654 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC1P02654 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 MESTP3-201ENST00000503460 968 ntBASIC12.98□□□□□ -0.33
APOC1P02654 FTLP10-202ENST00000505798 471 ntBASIC12.98□□□□□ -0.33
APOC1P02654 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.98□□□□□ -0.33
APOC1P02654 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 MYADML-201ENST00000474610 2147 ntBASIC12.98□□□□□ -0.33
APOC1P02654 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 AC011840.2-201ENST00000563063 1520 ntBASIC12.98□□□□□ -0.33
APOC1P02654 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOC1P02654 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC1P02654 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOC1P02654 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOC1P02654 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.97□□□□□ -0.33
APOC1P02654 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 ALG3P1-201ENST00000508806 1114 ntBASIC12.97□□□□□ -0.33
APOC1P02654 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.97□□□□□ -0.33
APOC1P02654 MIR4745-201ENST00000577608 62 ntBASIC12.97□□□□□ -0.33
APOC1P02654 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.97□□□□□ -0.33
APOC1P02654 ENPP7P14-201ENST00000621765 1040 ntBASIC12.97□□□□□ -0.33
APOC1P02654 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOC1P02654 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
APOC1P02654 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOC1P02654 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms