Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.02□□□□□ -0.32
CNOT4O95628 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.02□□□□□ -0.32
CNOT4O95628 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.02□□□□□ -0.32
CNOT4O95628 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.02□□□□□ -0.32
CNOT4O95628 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.02□□□□□ -0.32
CNOT4O95628 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.02□□□□□ -0.32
CNOT4O95628 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.02□□□□□ -0.32
CNOT4O95628 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CNOT4O95628 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 CICP23-201ENST00000605013 2741 ntBASIC13.02□□□□□ -0.32
CNOT4O95628 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.02□□□□□ -0.33
CNOT4O95628 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.02□□□□□ -0.33
CNOT4O95628 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.02□□□□□ -0.33
CNOT4O95628 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CNOT4O95628 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.02□□□□□ -0.33
CNOT4O95628 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.02□□□□□ -0.33
CNOT4O95628 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CNOT4O95628 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 AC005324.6-201ENST00000587972 613 ntBASIC13.02□□□□□ -0.33
CNOT4O95628 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CNOT4O95628 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 AC005089.1-201ENST00000619486 2241 ntBASIC13.02□□□□□ -0.33
CNOT4O95628 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 AL136172.1-201ENST00000598590 1394 ntBASIC13.02□□□□□ -0.33
CNOT4O95628 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CNOT4O95628 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CNOT4O95628 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CNOT4O95628 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 AC026748.1-201ENST00000624349 3251 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.01□□□□□ -0.33
CNOT4O95628 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.01□□□□□ -0.33
CNOT4O95628 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 AC021723.1-201ENST00000486306 515 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.01□□□□□ -0.33
CNOT4O95628 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.01□□□□□ -0.33
CNOT4O95628 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.01□□□□□ -0.33
CNOT4O95628 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.01□□□□□ -0.33
CNOT4O95628 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 AL136295.7-201ENST00000619226 1200 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 AC015967.2-201ENST00000624092 234 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 AC006435.4-201ENST00000625037 234 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 AL356737.1-201ENST00000634391 234 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.01□□□□□ -0.33
CNOT4O95628 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 AC009093.10-201ENST00000641956 1442 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.01□□□□□ -0.33
CNOT4O95628 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 AJ011931.1-201ENST00000618749 2492 ntBASIC13.01□□□□□ -0.33
CNOT4O95628 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CNOT4O95628 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CNOT4O95628 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.01□□□□□ -0.33
CNOT4O95628 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms