Protein–RNA interactions for Protein: O94907

DKK1, Dickkopf-related protein 1, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK1O94907 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
DKK1O94907 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.65□□□□□ -0.22
DKK1O94907 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 BRI3P1-201ENST00000440440 378 ntBASIC13.65□□□□□ -0.22
DKK1O94907 RPL3P5-201ENST00000441645 1232 ntBASIC13.65□□□□□ -0.22
DKK1O94907 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
DKK1O94907 BCRP4-201ENST00000506079 804 ntBASIC13.65□□□□□ -0.22
DKK1O94907 KRT18P37-201ENST00000520711 1282 ntBASIC13.65□□□□□ -0.22
DKK1O94907 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK1O94907 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.65□□□□□ -0.22
DKK1O94907 AC018846.1-201ENST00000568231 183 ntBASIC13.65□□□□□ -0.22
DKK1O94907 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.65□□□□□ -0.22
DKK1O94907 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.65□□□□□ -0.22
DKK1O94907 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
DKK1O94907 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
DKK1O94907 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
DKK1O94907 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 AC144831.1-201ENST00000573312 2656 ntBASIC13.65□□□□□ -0.22
DKK1O94907 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.65□□□□□ -0.22
DKK1O94907 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 LINC00554-201ENST00000564841 3011 ntBASIC13.64□□□□□ -0.23
DKK1O94907 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
DKK1O94907 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.64□□□□□ -0.23
DKK1O94907 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK1O94907 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 KLF17P1-201ENST00000547105 1126 ntBASIC13.64□□□□□ -0.23
DKK1O94907 DLK1-205ENST00000556051 469 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK1O94907 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.64□□□□□ -0.23
DKK1O94907 AL009176.1-201ENST00000607876 650 ntBASIC13.64□□□□□ -0.23
DKK1O94907 AC108673.2-201ENST00000608909 565 ntBASIC13.64□□□□□ -0.23
DKK1O94907 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.64□□□□□ -0.23
DKK1O94907 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
DKK1O94907 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 ODCP-201ENST00000459650 1639 ntBASIC13.64□□□□□ -0.23
DKK1O94907 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
DKK1O94907 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
DKK1O94907 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms