Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.56□□□□□ -0.08
NDUFS3O75489 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.56□□□□□ -0.08
NDUFS3O75489 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NDUFS3O75489 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 AC063926.2-201ENST00000623766 1308 ntBASIC14.56□□□□□ -0.08
NDUFS3O75489 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NDUFS3O75489 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 AC016397.2-201ENST00000624848 1985 ntBASIC14.56□□□□□ -0.08
NDUFS3O75489 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NDUFS3O75489 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFS3O75489 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFS3O75489 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFS3O75489 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 HSPA8P5-201ENST00000456928 2069 ntBASIC14.55□□□□□ -0.08
NDUFS3O75489 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 AC010141.1-201ENST00000411585 623 ntBASIC14.55□□□□□ -0.08
NDUFS3O75489 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.55□□□□□ -0.08
NDUFS3O75489 HIST2H2BB-201ENST00000449108 381 ntBASIC14.55□□□□□ -0.08
NDUFS3O75489 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 AC008687.7-202ENST00000637404 953 ntBASIC14.55□□□□□ -0.08
NDUFS3O75489 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFS3O75489 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFS3O75489 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFS3O75489 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFS3O75489 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.54□□□□□ -0.08
NDUFS3O75489 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 MIR326-201ENST00000362220 95 ntBASIC14.54□□□□□ -0.08
NDUFS3O75489 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 U91328.1-201ENST00000437528 223 ntBASIC14.54□□□□□ -0.08
NDUFS3O75489 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.54□□□□□ -0.08
NDUFS3O75489 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 AC005586.2-201ENST00000563946 837 ntBASIC14.54□□□□□ -0.08
NDUFS3O75489 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.54□□□□□ -0.08
NDUFS3O75489 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.54□□□□□ -0.08
NDUFS3O75489 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.54□□□□□ -0.08
NDUFS3O75489 TCAM1P-207ENST00000485295 1537 ntBASIC14.54□□□□□ -0.08
NDUFS3O75489 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NDUFS3O75489 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NDUFS3O75489 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NDUFS3O75489 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NDUFS3O75489 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms