Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
GADD45BO75293 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GADD45BO75293 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.65■□□□□ 0.26
GADD45BO75293 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 AC022137.2-201ENST00000503482 481 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 KRT18P25-201ENST00000508931 1278 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 AC027237.1-201ENST00000560942 655 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 AP001063.1-201ENST00000568332 529 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 AC005498.2-205ENST00000593218 784 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 TMEM261P1-201ENST00000604899 340 ntBASIC16.65■□□□□ 0.26
GADD45BO75293 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GADD45BO75293 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GADD45BO75293 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.65■□□□□ 0.26
GADD45BO75293 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
GADD45BO75293 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC16.64■□□□□ 0.25
GADD45BO75293 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.64■□□□□ 0.25
GADD45BO75293 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.64■□□□□ 0.25
GADD45BO75293 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GADD45BO75293 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GADD45BO75293 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 RN7SKP175-201ENST00000408472 289 ntBASIC16.64■□□□□ 0.25
GADD45BO75293 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.64■□□□□ 0.25
GADD45BO75293 SPTLC1P1-201ENST00000447199 261 ntBASIC16.64■□□□□ 0.25
GADD45BO75293 ALG3P1-201ENST00000508806 1114 ntBASIC16.64■□□□□ 0.25
GADD45BO75293 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GADD45BO75293 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.64■□□□□ 0.25
GADD45BO75293 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.64■□□□□ 0.25
GADD45BO75293 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GADD45BO75293 AC145423.3-201ENST00000615987 467 ntBASIC16.64■□□□□ 0.25
GADD45BO75293 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GADD45BO75293 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms