Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 CYP46A4P-201ENST00000414953 267 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.08□□□□□ -0.16
CPNE3O75131 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 ALG3P1-201ENST00000508806 1114 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC14.08□□□□□ -0.16
CPNE3O75131 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 AC005324.6-201ENST00000587972 613 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.08□□□□□ -0.16
CPNE3O75131 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.08□□□□□ -0.16
CPNE3O75131 REXO1L2P-201ENST00000425429 2069 ntBASIC14.08□□□□□ -0.16
CPNE3O75131 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CPNE3O75131 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPNE3O75131 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CPNE3O75131 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CPNE3O75131 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.07□□□□□ -0.16
CPNE3O75131 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.07□□□□□ -0.16
CPNE3O75131 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AC012441.2-201ENST00000444843 739 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE3O75131 RN7SL11P-201ENST00000471305 293 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE3O75131 MIR3619-201ENST00000579667 83 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AL645939.5-201ENST00000606834 243 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 AC026740.1-201ENST00000607068 791 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 AP001505.2-201ENST00000616815 443 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 CU633904.3-201ENST00000624042 1029 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC14.07□□□□□ -0.16
CPNE3O75131 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.07□□□□□ -0.16
CPNE3O75131 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 COL6A4P2-202ENST00000504443 2753 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CPNE3O75131 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CPNE3O75131 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CPNE3O75131 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AL390755.1-201ENST00000623716 2027 ntBASIC14.07□□□□□ -0.16
CPNE3O75131 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPNE3O75131 AGAP7P-201ENST00000582299 2062 ntBASIC14.06□□□□□ -0.16
CPNE3O75131 AGAP14-201ENST00000624701 2060 ntBASIC14.06□□□□□ -0.16
CPNE3O75131 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CPNE3O75131 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms