Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC3O60481 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 AC006335.1-201ENST00000445200 547 ntBASIC13.04□□□□□ -0.32
ZIC3O60481 IGHJ2P-201ENST00000454480 60 ntBASIC13.04□□□□□ -0.32
ZIC3O60481 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
ZIC3O60481 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 AC090857.1-201ENST00000527400 390 ntBASIC13.04□□□□□ -0.32
ZIC3O60481 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.04□□□□□ -0.32
ZIC3O60481 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ZIC3O60481 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 HSPA8P5-201ENST00000456928 2069 ntBASIC13.04□□□□□ -0.32
ZIC3O60481 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZIC3O60481 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZIC3O60481 FAM45BP-202ENST00000592932 1624 ntBASIC13.03□□□□□ -0.32
ZIC3O60481 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ZIC3O60481 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ZIC3O60481 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 AL662890.1-201ENST00000396818 632 ntBASIC13.03□□□□□ -0.32
ZIC3O60481 SLC25A24P2-201ENST00000415059 510 ntBASIC13.03□□□□□ -0.32
ZIC3O60481 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC3O60481 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.03□□□□□ -0.32
ZIC3O60481 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC3O60481 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC3O60481 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.03□□□□□ -0.32
ZIC3O60481 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 AC023908.3-201ENST00000564211 3047 ntBASIC13.03□□□□□ -0.32
ZIC3O60481 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.03□□□□□ -0.32
ZIC3O60481 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.03□□□□□ -0.32
ZIC3O60481 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.03□□□□□ -0.32
ZIC3O60481 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ZIC3O60481 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ZIC3O60481 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ZIC3O60481 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.02□□□□□ -0.32
ZIC3O60481 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms