Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHMP2AO43633 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 RN7SL11P-201ENST00000471305 293 ntBASIC16.37■□□□□ 0.21
CHMP2AO43633 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 SORD2P-201ENST00000558556 1069 ntBASIC16.37■□□□□ 0.21
CHMP2AO43633 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.37■□□□□ 0.21
CHMP2AO43633 AL132994.2-201ENST00000603120 687 ntBASIC16.37■□□□□ 0.21
CHMP2AO43633 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 AL805961.1-203ENST00000641078 1258 ntBASIC16.37■□□□□ 0.21
CHMP2AO43633 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHMP2AO43633 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CHMP2AO43633 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.37■□□□□ 0.21
CHMP2AO43633 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 AC012617.1-204ENST00000586340 2305 ntBASIC16.36■□□□□ 0.21
CHMP2AO43633 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 AC078875.1-201ENST00000431907 724 ntBASIC16.36■□□□□ 0.21
CHMP2AO43633 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.36■□□□□ 0.21
CHMP2AO43633 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 TUBBP5-203ENST00000508529 1334 ntBASIC16.36■□□□□ 0.21
CHMP2AO43633 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.36■□□□□ 0.21
CHMP2AO43633 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.36■□□□□ 0.21
CHMP2AO43633 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHMP2AO43633 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC005912.2-201ENST00000619492 2400 ntBASIC16.35■□□□□ 0.21
CHMP2AO43633 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHMP2AO43633 KRT18P36-201ENST00000411618 1276 ntBASIC16.35■□□□□ 0.21
CHMP2AO43633 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP2AO43633 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP2AO43633 IGHJ2P-201ENST00000454480 60 ntBASIC16.35■□□□□ 0.21
CHMP2AO43633 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.35■□□□□ 0.21
CHMP2AO43633 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 AL157813.1-201ENST00000612996 587 ntBASIC16.35■□□□□ 0.21
CHMP2AO43633 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.35■□□□□ 0.21
CHMP2AO43633 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms