Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
O00370 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
O00370 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
O00370 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
O00370 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 MIR1908-201ENST00000410394 80 ntBASIC15.53■□□□□ 0.08
O00370 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
O00370 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.53■□□□□ 0.08
O00370 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.53■□□□□ 0.08
O00370 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.53■□□□□ 0.08
O00370 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.53■□□□□ 0.08
O00370 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
O00370 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
O00370 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
O00370 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
O00370 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
O00370 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.53■□□□□ 0.08
O00370 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
O00370 AC011498.7-201ENST00000624986 2027 ntBASIC15.53■□□□□ 0.08
O00370 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.53■□□□□ 0.08
O00370 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
O00370 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
O00370 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.52■□□□□ 0.08
O00370 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
O00370 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.52■□□□□ 0.08
O00370 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.52■□□□□ 0.08
O00370 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.52■□□□□ 0.08
O00370 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
O00370 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
O00370 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
O00370 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
O00370 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
O00370 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
O00370 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.52■□□□□ 0.08
O00370 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.52■□□□□ 0.08
O00370 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.52■□□□□ 0.08
O00370 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.52■□□□□ 0.08
O00370 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.52■□□□□ 0.08
O00370 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.52■□□□□ 0.08
O00370 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
O00370 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.52■□□□□ 0.08
O00370 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.52■□□□□ 0.08
O00370 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.52■□□□□ 0.07
O00370 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
O00370 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
O00370 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.52■□□□□ 0.07
O00370 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.52■□□□□ 0.07
O00370 REXO1L6P-201ENST00000603433 1515 ntBASIC15.52■□□□□ 0.07
O00370 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms