Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 COX5BP1-201ENST00000507622 393 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 AP000812.2-201ENST00000538934 718 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 AC106886.1-201ENST00000568660 600 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 MIR4683-201ENST00000579659 81 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 AC073413.1-201ENST00000603927 732 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.81□□□□□ -0.2
UPK1AO00322 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.81□□□□□ -0.2
UPK1AO00322 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UPK1AO00322 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UPK1AO00322 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
UPK1AO00322 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UPK1AO00322 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.81□□□□□ -0.2
UPK1AO00322 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
UPK1AO00322 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 PDIA3P1-201ENST00000471856 1510 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 AL590440.2-201ENST00000641973 1595 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 Z82170.1-201ENST00000625081 3192 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.8□□□□□ -0.2
UPK1AO00322 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
UPK1AO00322 RN7SL713P-201ENST00000582127 302 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.8□□□□□ -0.2
UPK1AO00322 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 AC002472.3-201ENST00000640124 621 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 KHSRPP1-201ENST00000427983 1768 ntBASIC13.8□□□□□ -0.2
UPK1AO00322 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1AO00322 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
UPK1AO00322 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UPK1AO00322 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1AO00322 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms