Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 IMP3P2-201ENST00000489760 475 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 MARK2P5-201ENST00000507649 634 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CHMP4BP1-201ENST00000556017 588 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC105129.2-201ENST00000559536 390 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AC008132.1-202ENST00000342005 1389 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 AL157791.1-201ENST00000553667 1699 ntBASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPA2E9PIF3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC092135.3-201ENST00000624151 1846 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 RN7SL769P-201ENST00000469386 295 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 RN7SL720P-201ENST00000488178 304 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC125604.1-201ENST00000496255 707 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC009884.2-201ENST00000603110 324 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC027601.3-201ENST00000622907 509 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC232323.1-201ENST00000540724 2099 ntBASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPA2E9PIF3 AC007292.2-201ENST00000593524 1812 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 MBLAC2-202ENST00000514906 1936 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms