Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 AC023090.2-201ENST00000625182 2110 ntBASIC14.17□□□□□ -0.14
C4orf47A7E2U8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
C4orf47A7E2U8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.16□□□□□ -0.14
C4orf47A7E2U8 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 AC226150.1-201ENST00000544259 466 ntBASIC14.16□□□□□ -0.14
C4orf47A7E2U8 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C4orf47A7E2U8 TEKT4P2-202ENST00000559466 1312 ntBASIC14.15□□□□□ -0.14
C4orf47A7E2U8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.15□□□□□ -0.14
C4orf47A7E2U8 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 KRT8P1-201ENST00000557533 1207 ntBASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C4orf47A7E2U8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms