Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC018735.1-201ENST00000437208 1502 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 AC090505.1-201ENST00000430515 1834 ntBASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RAI2Q9Y5P3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 MIR33B-201ENST00000385104 96 ntBASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 RBM8B-201ENST00000555532 525 ntBASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 AL009178.2-201ENST00000597278 2719 ntBASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 AC067750.1-201ENST00000608826 6545 ntBASIC14.75□□□□□ -0.05
RAI2Q9Y5P3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 RPL18P13-201ENST00000478088 569 ntBASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 MIR3619-201ENST00000579667 83 ntBASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC005324.6-201ENST00000587972 613 ntBASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC097724.1-201ENST00000609581 426 ntBASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC138627.1-207ENST00000641560 1006 ntBASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAI2Q9Y5P3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAI2Q9Y5P3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms