Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC015818.8-201ENST00000587907 1519 ntBASIC12.83□□□□□ -0.36
RHBDD3Q9Y3P4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC130686.1-201ENST00000622936 2466 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC245100.3-201ENST00000441281 285 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 RN7SL837P-201ENST00000463010 287 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC011495.1-201ENST00000498085 584 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC106760.1-201ENST00000508690 800 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AL138709.1-201ENST00000614840 1693 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AL138725.1-201ENST00000407347 1314 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 AC011840.2-201ENST00000563063 1520 ntBASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.82□□□□□ -0.36
RHBDD3Q9Y3P4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AL136172.1-201ENST00000598590 1394 ntBASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AC023794.5-201ENST00000564380 2157 ntBASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AP001889.1-201ENST00000525414 633 ntBASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 ENPP7P14-201ENST00000621765 1040 ntBASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RHBDD3Q9Y3P4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms