Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AL589702.1-201ENST00000641229 1509 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AC092474.2-201ENST00000424288 719 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 ACTG1P14-201ENST00000446382 1122 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 DNAJB3-202ENST00000449667 1266 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 AC026120.1-201ENST00000611536 926 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 REXO1L4P-201ENST00000605109 1937 ntBASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.39□□□□□ -0.43
UBQLN2Q9UHD9 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AL691432.1-201ENST00000596308 1422 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 YBX1P5-201ENST00000509441 847 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 KRT8P48-201ENST00000515599 1220 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AC109635.5-201ENST00000533593 962 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AC079781.4-201ENST00000641908 219 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AP3S2-216ENST00000617003 1561 ntBASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms