Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC139749.1-202ENST00000617529 3139 ntBASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 UPF3AP2-201ENST00000457924 1132 ntBASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AL133499.1-201ENST00000596207 608 ntBASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.23■□□□□ 0.67
NPC1L1Q9UHC9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AC092506.1-202ENST00000401022 528 ntBASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 ALG1L13P-202ENST00000519320 584 ntBASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AC134698.3-201ENST00000523880 214 ntBASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 GOLGA8IP-202ENST00000611635 2100 ntBASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPC1L1Q9UHC9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AL583805.1-201ENST00000391389 531 ntBASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AL021707.6-201ENST00000609212 491 ntBASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 AP002414.2-201ENST00000591780 3365 ntBASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC19.21■□□□□ 0.67
NPC1L1Q9UHC9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms