Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 DGCR5-201ENST00000399539 862 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AL353779.1-201ENST00000434793 351 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SPDYE22P-201ENST00000582158 798 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AL049840.4-201ENST00000602422 811 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AC093726.1-201ENST00000608064 963 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AC099568.2-201ENST00000609194 695 ntBASIC12.95□□□□□ -0.34
DUX4Q9UBX2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DUX4Q9UBX2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 MEP1AP4-201ENST00000423244 1087 ntBASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TP53TG3HP-202ENST00000569755 579 ntBASIC12.94□□□□□ -0.34
DUX4Q9UBX2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DUX4Q9UBX2 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DUX4Q9UBX2 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms