Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC004835.2-201ENST00000603762 682 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AC009093.7-201ENST00000623853 1223 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AL109936.8-201ENST00000641772 604 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AL445209.1-201ENST00000607269 3491 ntBASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SND1-IT1Q9HBX3 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PCDHB18P-202ENST00000526308 3197 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AP000344.2-201ENST00000512987 629 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SDHAP3-202ENST00000515467 728 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PGAM5P1-201ENST00000518923 814 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 KRT18P58-201ENST00000527480 1120 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AC004461.2-201ENST00000629517 803 ntBASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SND1-IT1Q9HBX3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms