Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AC232323.1-201ENST00000540724 2099 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 RPL13AP3-202ENST00000494676 1473 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 MIR1301-201ENST00000408518 82 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AC026470.1-201ENST00000478038 846 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 AL009176.1-201ENST00000607876 650 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 SHMT1P1-201ENST00000419974 1312 ntBASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDH11XQ9BZA7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH11XQ9BZA7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AC103592.1-201ENST00000394513 664 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 KRT18P62-201ENST00000446618 1287 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 EEF1GP8-201ENST00000506566 1154 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AC090136.2-201ENST00000517809 420 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 KRT18P37-201ENST00000520711 1282 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 GOLGA2P7-209ENST00000560408 745 ntBASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDH11XQ9BZA7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDH11XQ9BZA7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms