Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 FKBP4P6-201ENST00000457486 1332 ntBASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PCGF1Q9BSM1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PCGF1Q9BSM1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.33□□□□□ -0.43
PCGF1Q9BSM1 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PCGF1Q9BSM1 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
PCGF1Q9BSM1 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
PCGF1Q9BSM1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AC108725.1-201ENST00000495472 409 ntBASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 FAM86HP-204ENST00000513466 959 ntBASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 INTS4P1-203ENST00000641008 3683 ntBASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PCGF1Q9BSM1 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PCGF1Q9BSM1 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms