Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
CCL13Q99616 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL13Q99616 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.23□□□□□ -0.45
CCL13Q99616 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCL13Q99616 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 AC007191.1-201ENST00000623179 2995 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL13Q99616 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 KRT8P29-201ENST00000420409 1371 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CCL13Q99616 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 AC011498.7-201ENST00000624986 2027 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 AL008718.2-201ENST00000609206 1313 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL13Q99616 AL157407.1-201ENST00000435784 904 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 AC012441.2-201ENST00000444843 739 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 AC104306.2-201ENST00000451877 341 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL13Q99616 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL13Q99616 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL13Q99616 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 SORD2P-201ENST00000558556 1069 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.22□□□□□ -0.45
CCL13Q99616 AC005962.1-201ENST00000584100 773 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 AC009884.2-201ENST00000603110 324 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 AC007663.3-201ENST00000609632 465 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 LINC01230-201ENST00000625222 3017 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 RN7SL832P-201ENST00000607781 1756 ntBASIC12.22□□□□□ -0.45
CCL13Q99616 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL13Q99616 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCL13Q99616 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL13Q99616 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 TMBIM7P-202ENST00000641474 1516 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL13Q99616 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms