Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
TRGV9Q99603 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
TRGV9Q99603 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 BAATP1-201ENST00000412284 1225 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.39□□□□□ -0.59
TRGV9Q99603 AC012441.1-201ENST00000446669 685 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.39□□□□□ -0.59
TRGV9Q99603 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.39□□□□□ -0.59
TRGV9Q99603 AC011495.1-201ENST00000498085 584 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 AL391280.1-201ENST00000506969 1062 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 SERBP1P5-201ENST00000510079 1181 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 KRT18P8-201ENST00000581937 1246 ntBASIC11.39□□□□□ -0.59
TRGV9Q99603 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.39□□□□□ -0.59
TRGV9Q99603 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TRGV9Q99603 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
TRGV9Q99603 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TRGV9Q99603 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 RFPL4AP1-201ENST00000530883 850 ntBASIC11.38□□□□□ -0.59
TRGV9Q99603 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.38□□□□□ -0.59
TRGV9Q99603 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 WFDC1-204ENST00000613603 549 ntBASIC11.38□□□□□ -0.59
TRGV9Q99603 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.38□□□□□ -0.59
TRGV9Q99603 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 AGAP10P-201ENST00000454844 2418 ntBASIC11.38□□□□□ -0.59
TRGV9Q99603 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
TRGV9Q99603 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TRGV9Q99603 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TRGV9Q99603 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms