Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 AC144522.1-201ENST00000625111 1658 ntBASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PDLIM5Q96HC4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AL359183.1-201ENST00000623796 2132 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AC067750.1-201ENST00000608826 6545 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AC099336.1-201ENST00000417053 1171 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 HLA-V-201ENST00000429037 534 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 YBX1P6-201ENST00000442962 1002 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AL160314.3-201ENST00000556041 767 ntBASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PDLIM5Q96HC4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AC005034.1-201ENST00000426657 489 ntBASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AC022217.1-201ENST00000521069 738 ntBASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 AP000346.4-201ENST00000614827 381 ntBASIC14.17□□□□□ -0.14
PDLIM5Q96HC4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms