Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC10.93□□□□□ -0.66
RNF183Q96D59 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 AL136309.1-201ENST00000403917 691 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.93□□□□□ -0.66
RNF183Q96D59 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC007969.1-201ENST00000433675 447 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 AC006033.1-201ENST00000440505 426 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 AC104306.2-201ENST00000451877 341 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.93□□□□□ -0.66
RNF183Q96D59 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.93□□□□□ -0.66
RNF183Q96D59 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC104982.3-201ENST00000581995 514 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC073413.1-201ENST00000603927 732 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 C18orf15-201ENST00000623680 2534 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.93□□□□□ -0.66
RNF183Q96D59 KRT8P4-201ENST00000509735 1454 ntBASIC10.93□□□□□ -0.66
RNF183Q96D59 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.93□□□□□ -0.66
RNF183Q96D59 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RNF183Q96D59 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.93□□□□□ -0.66
RNF183Q96D59 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 WASH3P-207ENST00000560956 1394 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC112693.3-201ENST00000624819 1983 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.92□□□□□ -0.66
RNF183Q96D59 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AP001258.2-201ENST00000529891 490 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms