Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZIC4Q8N9L1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.83□□□□□ -0.35
ZIC4Q8N9L1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 AC243960.2-201ENST00000600996 747 ntBASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZIC4Q8N9L1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 MIR600HG-201ENST00000449175 5984 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 AC016700.1-201ENST00000429424 312 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 AC091804.1-201ENST00000486888 567 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 TUBB8P4-201ENST00000511806 1324 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 TCAM1P-207ENST00000485295 1537 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 AC104581.4-201ENST00000623126 3052 ntBASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms