Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 AC006001.1-201ENST00000325130 474 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 AL136309.1-201ENST00000403917 691 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 FAM197Y7-201ENST00000432892 766 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 AL590640.2-201ENST00000457038 527 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 RN7SL713P-201ENST00000582127 302 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 KRT8P24-201ENST00000560290 1559 ntBASIC13.41□□□□□ -0.26
LSMEM1Q8N8F7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC007551.1-201ENST00000457394 519 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AP005018.1-201ENST00000525475 301 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 KRT90P-201ENST00000549264 1064 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC027237.1-201ENST00000560942 655 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AC132938.2-201ENST00000579188 680 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 AL591163.1-201ENST00000641757 987 ntBASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LSMEM1Q8N8F7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 HSPA8P5-201ENST00000456928 2069 ntBASIC13.4□□□□□ -0.27
LSMEM1Q8N8F7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms