Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SCUBE3Q8IX30 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 RBM8B-201ENST00000555532 525 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 BNIP3P13-201ENST00000599968 566 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AL118558.3-201ENST00000607414 1079 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AC022748.3-201ENST00000621828 275 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AC144522.1-201ENST00000625111 1658 ntBASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SCUBE3Q8IX30 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
SCUBE3Q8IX30 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 KATNBL1P2-201ENST00000433311 835 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AC104073.2-201ENST00000453737 312 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 RHOQP1-201ENST00000555758 579 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 MIR3615-201ENST00000581999 87 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AL158211.2-201ENST00000607282 395 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 AL008638.5-201ENST00000623814 1298 ntBASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.33■□□□□ 0.04
SCUBE3Q8IX30 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms