Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL3Q8IVW4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDKL3Q8IVW4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AHCYP2-201ENST00000430630 1300 ntBASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AC010141.1-201ENST00000411585 623 ntBASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 AC104506.1-201ENST00000609247 429 ntBASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 RHOXF1P1-202ENST00000635473 501 ntBASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL3Q8IVW4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 KRT17P7-201ENST00000451704 1104 ntBASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL3Q8IVW4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms