Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 ERP29P1-201ENST00000442902 706 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC093909.3-201ENST00000504783 336 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC012158.2-201ENST00000536546 354 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 KRT8P1-201ENST00000557533 1207 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AL118516.1-201ENST00000564152 670 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC007952.4-201ENST00000573866 637 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AP003392.6-201ENST00000607709 325 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 MIR600HG-201ENST00000449175 5984 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 AC023024.2-201ENST00000623561 1993 ntBASIC15.69■□□□□ 0.1
HERC6Q8IVU3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HERC6Q8IVU3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC009093.10-201ENST00000641956 1442 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 KRT8P28-201ENST00000433288 1390 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 WASH3P-207ENST00000560956 1394 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC073869.2-201ENST00000417338 1026 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 RPL18AP8-201ENST00000486071 528 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC140113.1-201ENST00000603467 169 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AC011471.3-201ENST00000623576 402 ntBASIC15.68■□□□□ 0.1
HERC6Q8IVU3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HERC6Q8IVU3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms