Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AC124319.4-201ENST00000622931 2161 ntBASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 Z97205.2-201ENST00000564697 1639 ntBASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 KRT8P14-201ENST00000414254 1442 ntBASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AL592309.1-201ENST00000443127 649 ntBASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AC104758.3-203ENST00000562938 2123 ntBASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.81□□□□□ -0.36
LYSMD2Q8IV50 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 RN7SL828P-201ENST00000607615 303 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 AC018529.1-201ENST00000613063 361 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 AF228730.6-201ENST00000641497 218 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 AC084121.3-201ENST00000641716 218 ntBASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.8□□□□□ -0.36
LYSMD2Q8IV50 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms