Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AL358472.3-201ENST00000608147 415 ntBASIC13.5□□□□□ -0.25
VRK2Q86Y07 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.5□□□□□ -0.25
VRK2Q86Y07 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.5□□□□□ -0.25
VRK2Q86Y07 AL157996.1-201ENST00000624684 2299 ntBASIC13.5□□□□□ -0.25
VRK2Q86Y07 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 CU639417.3-201ENST00000624240 1404 ntBASIC13.49□□□□□ -0.25
VRK2Q86Y07 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AC130686.1-201ENST00000622936 2466 ntBASIC13.49□□□□□ -0.25
VRK2Q86Y07 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.49□□□□□ -0.25
VRK2Q86Y07 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 MIR1202-201ENST00000408529 83 ntBASIC13.49□□□□□ -0.25
VRK2Q86Y07 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
VRK2Q86Y07 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VRK2Q86Y07 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC009093.10-201ENST00000641956 1442 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
VRK2Q86Y07 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VRK2Q86Y07 AC064801.2-201ENST00000625052 1303 ntBASIC13.48□□□□□ -0.25
VRK2Q86Y07 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms