Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 AC069218.1-201ENST00000435269 762 ntBASIC15.46■□□□□ 0.07
VARS2Q5ST30 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 DEFT1P-201ENST00000453425 496 ntBASIC15.46■□□□□ 0.07
VARS2Q5ST30 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 MIR3147-201ENST00000577811 66 ntBASIC15.46■□□□□ 0.07
VARS2Q5ST30 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VARS2Q5ST30 CAP2P1-201ENST00000557743 1390 ntBASIC15.46■□□□□ 0.07
VARS2Q5ST30 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
VARS2Q5ST30 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.46■□□□□ 0.06
VARS2Q5ST30 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.46■□□□□ 0.06
VARS2Q5ST30 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARS2Q5ST30 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.46■□□□□ 0.06
VARS2Q5ST30 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARS2Q5ST30 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.46■□□□□ 0.06
VARS2Q5ST30 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VARS2Q5ST30 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.46■□□□□ 0.06
VARS2Q5ST30 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 RPL8P2-201ENST00000430538 502 ntBASIC15.45■□□□□ 0.06
VARS2Q5ST30 MTND1P26-201ENST00000440488 538 ntBASIC15.45■□□□□ 0.06
VARS2Q5ST30 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PHBP15-201ENST00000574228 665 ntBASIC15.45■□□□□ 0.06
VARS2Q5ST30 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 AC018635.2-201ENST00000608625 364 ntBASIC15.45■□□□□ 0.06
VARS2Q5ST30 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 AL354702.1-201ENST00000442006 1960 ntBASIC15.45■□□□□ 0.06
VARS2Q5ST30 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
VARS2Q5ST30 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
VARS2Q5ST30 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.44■□□□□ 0.06
VARS2Q5ST30 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms